CMUSchwartzLab
Popular repositories Loading
-
cancer-phylogenetics-prognostic-prediction
cancer-phylogenetics-prognostic-prediction PublicImproving Personalized Prediction of Cancer Prognoses with Clonal Evolution Models
-
FISH_deconvolution
FISH_deconvolution Publiccode implementing methods for pooling bulk and single cell data and FISH data for copy number deconvolution
Repositories
- mutation-subsampling Public
- TUSV-INT Public
- Sc-TUSV-ext Public
Sc-TUSV-ext: Tumor evolutionary tree reconstruction from single-cell DNA-seq data of single nucleotide variants (SNV), copy number alterations (CNA) and structural variants (SV).
- TUSV-ext Public
- StudyDesignOptimization Public
- SimGenomeSc Public
Single-cell DNA-seq simulation with SNVs, CNAs and SVs for Sc-TUSV-ext. This is an extension of the bulk simulation done by Xuecong Fu, for TUSV-ext.
- MosaicSim Public
- SimGenome Public
Simulation of the somatic variations (structural variations, copy number variations and single nucleotide variations) in whole genome based on tumor phylogenetic trees. SimGenome is the simulation method used in TUSV-ext project.
- ConTreeDP Public
Consensus method for tumor history tree based on directed partitions using dynamic programming
People
This organization has no public members. You must be a member to see who’s a part of this organization.
Top languages
Loading…
Most used topics
Loading…