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EGA-archive

European Genome-Phenome Archive

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ega-quickview ega-quickview Public

FUSE file system to access EGA files securely and remotely

C 6
crypt4gh crypt4gh Public

GA4GH cryptographic tools

Python 24 17
ega-download-client ega-download-client Public

A Python-based EGA download client

Python 119 53
beacon2-pi-api beacon2-pi-api Public

Beacon v2 Production Implementation (API)

Python 9 17

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Showing 10 of 73 repositories

beacon2-pi-api Public
Beacon v2 Production Implementation (API)

EGA-archive/beacon2-pi-api's past year of commit activity

Python 9 Apache-2.0 17 0 0 Updated Jul 17, 2026
beacon-template-ui Public

EGA-archive/beacon-template-ui's past year of commit activity

JavaScript 6 Apache-2.0 8 3 0 Updated Jul 17, 2026
EGA-beacon-browser Public

EGA-archive/EGA-beacon-browser's past year of commit activity

HTML 0 Apache-2.0 0 0 0 Updated Jul 2, 2026
beacon-ri-documentation Public

EGA-archive/beacon-ri-documentation's past year of commit activity

TypeScript 0 Apache-2.0 1 1 0 Updated Jul 2, 2026
beacon-verifier-v2 Public

EGA-archive/beacon-verifier-v2's past year of commit activity

Python 1 Apache-2.0 0 0 0 Updated Jul 2, 2026
fega-metadata-schema Public
Repository dedicated to the development of the Federated EGA (FEGA) metadata schemas and documentation

EGA-archive/fega-metadata-schema's past year of commit activity

1 MIT 5 6 1 Updated Jul 1, 2026
refgenDetector Public
RefgenDetector infers the reference genome assembly used to generate alignment and VCF files.

EGA-archive/refgenDetector's past year of commit activity

Python 2 2 0 0 Updated Jun 29, 2026
AF_hail_pipeline Public
This pipeline generates a VCF annotated with allele frequencies stratified by ancestry and sex.

EGA-archive/AF_hail_pipeline's past year of commit activity

Python 1 0 0 0 Updated Jun 23, 2026
crypt4gh Public
GA4GH cryptographic tools

EGA-archive/crypt4gh's past year of commit activity

Python 24 Apache-2.0 17 0 0 Updated Jun 8, 2026
ega-biomongo-tools Public
biomongo-tools is a Python toolkit designed to manage the information inside of Biomongo.

EGA-archive/ega-biomongo-tools's past year of commit activity

Python 0 Apache-2.0 2 1 0 Updated Jun 5, 2026

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