Redex is a spatial omics analysis framework for identifying spatially variable features, segmenting spatial domains, and discovering region-specific marker features from spatial transcriptomics, spatial ATAC-seq, and derived feature matrices.

RENDOR method for removing indirect noise

Incorporating network diffusion and peak location information for better single-cell ATAC-seq data analysis

We have deposited all the necessary data and code required to reproduce the findings in SCARP stduy in this repository.

Link prediction using Multiple Order Local Information (MOLI)

Importance-Penalized Joint Graphical Lasso (IPJGL)

Network Refinement: Denoising complex networks for better community detection.