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chore(deps): bump pypa/gh-action-pypi-publish from 1.14.0 to 1.14.1 - #243

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chore(deps): bump pypa/gh-action-pypi-publish from 1.14.0 to 1.14.1#243
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Bumps pypa/gh-action-pypi-publish from 1.14.0 to 1.14.1.

Release notes

Sourced from pypa/gh-action-pypi-publish's releases.

v1.14.1

🛠️ Internal Dependencies

@​adisivaprasad💰 helped get rid of the GitHub Actions runner warning about the old Node 20 runtime being used by updating actions/setup-python from v5.6.0 to v6.2.0 in #408.

💪 New Contributors

🪞 Full Diff: pypa/gh-action-pypi-publish@v1.14.0...v1.14.1

🧔‍♂️ Release Manager: @​webknjaz 🇺🇦

🙏 Special Thanks to @​jylenhof💰 for reminding me to work on this release!

💬 Discuss on Bluesky 🦋, on Mastodon 🐘 and on GitHub.

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Commits
  • ba38be9 Merge pull request #408 from adisivaprasad/bump-setup-python-v6
  • a6c5088 Bump actions/setup-python from v5.6.0 to v6.2.0
  • See full diff in compare view

@dependabot dependabot Bot added dependencies Pull requests that update a dependency file github_actions Pull requests that update GitHub Actions code labels Jul 30, 2026
@sarahnlewis
sarahnlewis enabled auto-merge (squash) July 30, 2026 14:33
@github-actions

github-actions Bot commented Jul 30, 2026

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Summary

Summary
Generated on: 07/30/2026 - 14:37:09
Parser: Cobertura
Assemblies: 5
Classes: 32
Files: 32
Line coverage: 85.3% (2153 of 2524)
Covered lines: 2153
Uncovered lines: 371
Coverable lines: 2524
Total lines: 8079
Covered branches: 0
Total branches: 0
Method coverage: Feature is only available for sponsors

Coverage

src.bioemu - 87.2%
Name Line Branch
src.bioemu 87.2% ****
init.py 100%
chemgraph.py 100%
convert_chemgraph.py 79.5%
denoiser.py 98.3%
get_embeds.py 92.1%
md_utils.py 85.8%
model_utils.py 80.4%
models.py 94.1%
run_hpacker.py 0%
sample.py 92.2%
sde_lib.py 88.3%
seq_io.py 100%
shortcuts.py 100%
sidechain_relax.py 75%
so3_sde.py 90.3%
structure_module.py 84.3%
utils.py 65.6%
src.bioemu.colabfold_inline - 79.1%
Name Line Branch
src.bioemu.colabfold_inline 79.1% ****
init.py
features.py 100%
input_parsing.py 100%
model_runner.py 99%
msa_client.py 60.8%
src.bioemu.hpacker_setup - 69.2%
Name Line Branch
src.bioemu.hpacker_setup 69.2% ****
init.py
setup_hpacker.py 69.2%
src.bioemu.steering - 79.5%
Name Line Branch
src.bioemu.steering 79.5% ****
init.py 100%
collective_variables.py 34.8%
dpm_fkc.py 100%
dpm_smc.py 100%
potentials.py 95.3%
utils.py 83.5%
src.bioemu.training - 100%
Name Line Branch
src.bioemu.training 100% ****
foldedness.py 100%
loss.py 100%

sarahnlewis
sarahnlewis reviewed Jul 30, 2026
View reviewed changes
Comment thread .github/workflows/publish.yml Outdated
@dependabot
chore(deps): bump pypa/gh-action-pypi-publish from 1.14.0 to 1.14.1
f1004eb 
Bumps [pypa/gh-action-pypi-publish](https://github.com/pypa/gh-action-pypi-publish) from 1.14.0 to 1.14.1.
- [Release notes](https://github.com/pypa/gh-action-pypi-publish/releases)
- [Commits](pypa/gh-action-pypi-publish@cef2210...ba38be9)

---
updated-dependencies:
- dependency-name: pypa/gh-action-pypi-publish
  dependency-version: 1.14.1
  dependency-type: direct:production
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <support@github.com>
@dependabot
dependabot Bot force-pushed the dependabot/github_actions/pypa/gh-action-pypi-publish-1.14.1 branch from d1f5e44 to f1004eb Compare July 30, 2026 14:46
Copilot AI requested a review from sarahnlewis July 30, 2026 14:46
@github-actions

github-actions Bot commented Jul 30, 2026

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Summary

Summary
Generated on: 07/30/2026 - 15:00:07
Parser: Cobertura
Assemblies: 5
Classes: 32
Files: 32
Line coverage: 85.3% (2153 of 2524)
Covered lines: 2153
Uncovered lines: 371
Coverable lines: 2524
Total lines: 8079
Covered branches: 0
Total branches: 0
Method coverage: Feature is only available for sponsors

Coverage

src.bioemu - 87.2%
Name Line Branch
src.bioemu 87.2% ****
init.py 100%
chemgraph.py 100%
convert_chemgraph.py 79.5%
denoiser.py 98.3%
get_embeds.py 92.1%
md_utils.py 85.8%
model_utils.py 80.4%
models.py 94.1%
run_hpacker.py 0%
sample.py 92.2%
sde_lib.py 88.3%
seq_io.py 100%
shortcuts.py 100%
sidechain_relax.py 75%
so3_sde.py 90.3%
structure_module.py 84.3%
utils.py 65.6%
src.bioemu.colabfold_inline - 79.1%
Name Line Branch
src.bioemu.colabfold_inline 79.1% ****
init.py
features.py 100%
input_parsing.py 100%
model_runner.py 99%
msa_client.py 60.8%
src.bioemu.hpacker_setup - 69.2%
Name Line Branch
src.bioemu.hpacker_setup 69.2% ****
init.py
setup_hpacker.py 69.2%
src.bioemu.steering - 79.5%
Name Line Branch
src.bioemu.steering 79.5% ****
init.py 100%
collective_variables.py 34.8%
dpm_fkc.py 100%
dpm_smc.py 100%
potentials.py 95.3%
utils.py 83.5%
src.bioemu.training - 100%
Name Line Branch
src.bioemu.training 100% ****
foldedness.py 100%
loss.py 100%

@github-actions

github-actions Bot commented Jul 30, 2026

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Summary

Summary
Generated on: 07/30/2026 - 15:01:53
Parser: Cobertura
Assemblies: 5
Classes: 32
Files: 32
Line coverage: 85.3% (2153 of 2524)
Covered lines: 2153
Uncovered lines: 371
Coverable lines: 2524
Total lines: 8079
Covered branches: 0
Total branches: 0
Method coverage: Feature is only available for sponsors

Coverage

src.bioemu - 87.2%
Name Line Branch
src.bioemu 87.2% ****
init.py 100%
chemgraph.py 100%
convert_chemgraph.py 79.5%
denoiser.py 98.3%
get_embeds.py 92.1%
md_utils.py 85.8%
model_utils.py 80.4%
models.py 94.1%
run_hpacker.py 0%
sample.py 92.2%
sde_lib.py 88.3%
seq_io.py 100%
shortcuts.py 100%
sidechain_relax.py 75%
so3_sde.py 90.3%
structure_module.py 84.3%
utils.py 65.6%
src.bioemu.colabfold_inline - 79.1%
Name Line Branch
src.bioemu.colabfold_inline 79.1% ****
init.py
features.py 100%
input_parsing.py 100%
model_runner.py 99%
msa_client.py 60.8%
src.bioemu.hpacker_setup - 69.2%
Name Line Branch
src.bioemu.hpacker_setup 69.2% ****
init.py
setup_hpacker.py 69.2%
src.bioemu.steering - 79.5%
Name Line Branch
src.bioemu.steering 79.5% ****
init.py 100%
collective_variables.py 34.8%
dpm_fkc.py 100%
dpm_smc.py 100%
potentials.py 95.3%
utils.py 83.5%
src.bioemu.training - 100%
Name Line Branch
src.bioemu.training 100% ****
foldedness.py 100%
loss.py 100%

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