PyTorch classifier predicting CRISPRi guide identity from single-cell expression (Adamson et al. 2016 Perturb-seq)
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Jul 28, 2026 - Python
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crispri
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Repository containing the code and methods for Bosch & DeJesus et al. 2021
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Sep 8, 2025 - R
Phenotypic screening of a CRISPRi strain library [Smith et 2017, Mol Syst Biol (2017)13:913] for acetic acid tolerance targeting essential and respiratory essential genes in Saccharomyces cerevisiae
yeast phenomics high-throughput-screening saccharomyces-cerevisiae stress-tolerance essential-genes scan-o-matic bioscreen acetic-acid crispri
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Oct 9, 2021 - R
AI-assisted platform for designing CRISPR experiments — from target selection to bench-ready protocols
python bioinformatics crispr gradio base-editing gene-editing guide-rna research-tools crispri prime-editing crispor crispra
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Apr 13, 2026 - Python
Reproducible CRISPRi/Perturb-seq analysis of an ENTPD1/CD39 T-cell program in rheumatoid arthritis and methotrexate treatment
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Jul 28, 2026 - Python
Adversarial-debate LLM agent for predicting CRISPRi perturbation effects on gene expression (Genentech MLGenX BioReasoning Challenge)
bioinformatics computational-biology gene-expression kaggle-competition crispri vllm llm-agents agentic-ai perturbation-biology
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Jul 21, 2026 - Python
🌱 Designing CRISPRi experiments in bacteria
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May 14, 2026 - Python
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